BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F07SP1|AL427791
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1480 1925 0.0
>3x_Contig1480
Length = 8659
Score = 1925 bits (969), Expect = 0.0
Identities = 989/995 (99%), Gaps = 2/995 (0%)
Strand = Plus / Minus
Query: 1 gatcaacagagatgttcattaggttggaacgctttaagtcctttgcattcttcacggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4894 gatcaacagagatgttcattaggttggaacgctttaagtcctttgcattcttcacggtta 4835
Query: 61 gctccaacacaccaattgacaatgcggaaccagacactaattgtggaatattcaattgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4834 gctccaacacaccaattgacaatgcggaaccagacactaattgtggaatattcaattgaa 4775
Query: 121 gcgagahaggtggcaaaaacaatgggcctagatactttctggctagttctcttgctaaag 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4774 gcgagaaaggtggcaaaaacaatgggcctagatactttctggctagttctcttgctaaag 4715
Query: 181 gtagaagacctggaatactcataatttcccagttgaaaacggtattacctaatagcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4714 gtagaagacctggaatactcataatttcccagttgaaaacggtattacctaatagcttgc 4655
Query: 241 aaacaaaatcgatatcaggaacgtccaaaaactgaatgttgacggtttcgatatgaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4654 aaacaaaatcgatatcaggaacgtccaaaaactgaatgttgacggtttcgatatgaggga 4595
Query: 301 aaggtgtcattagcttcatacgaaccctaacacgagctttgaaagcgatatctgctacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4594 aaggtgtcattagcttcatacgaaccctaacacgagctttgaaagcgatatctgctacaa 4535
Query: 361 ccactggtacagttaaaccgaaaagtttcgccttaaggacaacggtttgattcacatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4534 ccactggtacagttaaaccgaaaagtttcgccttaaggacaacggtttgattcacatagt 4475
Query: 421 tacgtaattgtttggaagtcaaatcagacaaatcgtgtggagtgaacgacatcccaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4474 tacgtaattgtttggaagtcaaatcagacaaatcgtgtggagtgaacgacatcccaaaat 4415
Query: 481 ccatgacgacaacatccaattcagtgttttggaaagtctttaccaagtcaattcttggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4414 ccatgacgacaacatccaattcagtgttttggaaagtctttaccaagtcaattcttggtg 4355
Query: 541 gttttatacccaatgtgaaacgatctatccacagtgcttttacgaaggctgggatcgctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4354 gttttatacccaatgtgaaacgatctatccacagtgcttttacgaaggctgggatcgctt 4295
Query: 601 cgttaacagcaatttgttcgttaacctgttccacaacaatttgagacaccgacggttcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4294 cgttaacagcaatttgttcgttaacctgttccacaacaatttgagacaccgacggttcaa 4235
Query: 661 ttattggccagtacttgtccaagaaactgttcaaccattccattgactcataatcatctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4234 ttattggccagtacttgtccaagaaactgttcaaccattccattgactcataatcatctt 4175
Query: 721 ccaccttttggacaacaaactcttttttgagcaagttctctaattgacattctatatttt 780
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4174 ccaccttttggacaacaaactc-tttttgagcaagttctctaattgacattctatatttt 4116
Query: 781 ttaactgaggtcctatagaacacagctgtagcaagaataatgaagaatacaggacctaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4115 ttaactgaggtcctatagaacacagctgtagcaagaataatgaagaatacaggacctaac 4056
Query: 841 gagaacttaaattttccaagcagaaaggaaaggaa-ccgcccataaaaaagattcctacc 899
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4055 gagaacttaaattttccaagcagaaaggaaaggaacccgcccataaaaaagattcctacc 3996
Query: 900 gcatgatacmaatccccgtacgccttatcaggaatgacattatctaggaaagtttcttma 959
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3995 gcatgataccaatccccgtacgccttatcaggaatgacattatctaggaaagtttcttca 3936
Query: 960 ttgactcccaataactcatcttcaaaagttaacgt 994
||||||||||||||||||||||||||||| |||||
Sbjct: 3935 ttgactcccaataactcatcttcaaaagtcaacgt 3901
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6999
Number of Sequences: 1807
Number of extensions: 6999
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)